MEGA |
http://megasoftware.net/ |
DnaSP |
http://www.ub.edu/dnasp/ |
ADOPS |
http://sing.ei.uvigo.es/ADOPS/ |
Protein Pattern Find |
http://www.bioinformatics.org/sms2/protein_pattern.html |
MrBayes |
http://mrbayes.csit.fsu.edu/ |
PAML |
http://abacus.gene.ucl.ac.uk/software/paml.html |
Datamonkey |
http://www.datamonkey.org/ |
ProSeq |
http://dps.plants.ox.ac.uk/sequencing/proseq.htm |
SplitsTree |
http://splitstree.org/ |
RDP |
http://darwin.uvigo.es/rdp/rdp.html |
Chromas |
http://www.technelysium.com.au/chromas.html |
TreeView |
http://taxonomy.zoology.gla.ac.uk/rod/treeview.html |
ClustalX |
http://www.clustal.org/ |
TCS |
http://darwin.uvigo.es/software/tcs.html |
Lineage Sequence Discovery |
http://code.google.com/p/lineagesequencediscovery/ |
SigDis |
http://cracs.fc.up.pt/~nf/projects/sigdis/ |
Lamarck |
http://evolution.gs.washington.edu/lamarc/index.html |
DAMBE |
http://dambe.bio.uottawa.ca/software.asp |
ALTER - file converter |
http://sing.ei.uvigo.es/ALTER/ |
Format conversion |
http://phylogeny.lirmm.fr/phylo_cgi/data_converter.cgi |
PileLine |
http://sing.ei.uvigo.es/pileline/index.php/Downloads |
Protein consensus |
http://coot.embl.de/Alignment/consensus.html |
Signal IP server |
http://www.cbs.dtu.dk/services/SignalP/ |
Ancestor |
http://ancestors.bioinfo.uqam.ca/ancestorWeb/ |
WebLogo |
http://weblogo.berkeley.edu/logo.cgi |
Galaxy |
https://usegalaxy.org/ |
dialin + chaos |
http://dialign.gobics.de/chaos-dialign-submission |
CD-HIT-ESt |
http://weizhong-lab.ucsd.edu/cdhit_suite/cgi-bin/index.cgi?cmd=cd-hit-est |
I-TASSER |
zhanglab.ccmb.med.umich.edu/I-TASSER/ |
DOCK/PIERR: Protein Docking Server |
http://clsb.ices.utexas.edu/web/dock.html |
Virtual Plant |
http://virtualplant.bio.nyu.edu/cgi-bin/vpweb/ |
UPGMA dendogram |
http://genomes.urv.cat/UPGMA/index.php?entrada=Example1 |
Construção de internet sites |
http://andreasviklund.com/ |
Compare lists |
http://barc.wi.mit.edu/tools/compare/ |
Convert fly IDs |
https://www.flyrnai.org/diopt |
Compi |
https://www.sing-group.org/compi/docs/index.html |
Selectome |
https://selectome.unil.ch |
BioDBnet |
https://biodbnet-abcc.ncifcrf.gov/db/db2db.php |
DEST |
https://dest.bio |
structure prediction (alphafold) |
https://yanglab.nankai.edu.cn/trRosetta/ |
FDR calculator |
https://www.sdmproject.com/utilities/?show=FDR |
Power of correlations |
https://www2.ccrb.cuhk.edu.hk/stat/other/correlation.htm |